Software

Build planning standardization for DNA assembly

Genetic Network Design Automation and simulation using ODE, ODE with noise, stochastic algorithm and PDE.

Transcription and translation analysis using statistical physics tools like TASEP.

Liquid handling robot control for lab automation on synthetic biology workflows.

Python package to connect to the Flapjack API for data analysis and management.

Experimental Data Connector, upload data to SynBioHub and Flapjack.

Semi-Automated Mitochondrial and Nucleoids segmentation and analysis.

Machine Learning Gene Expression Analysis.

Link to external projects that I participated or lead as student representative at IIBMers, like plant growing automation, use of IoT for lab automation, organization of a conference.